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Anal canal above vs below the pectinate line

The pectinate line is the junction of hindgut and ectoderm, so almost everything changes across it — epithelium, blood supply, lymph, nerves and the diseases that arise.

FeatureAbove the pectinate lineBelow the pectinate line
OriginHindgut endodermEctodermal proctodeum
EpitheliumColumnarStratified squamous (non-keratinized in the pecten, keratinized in the perianal skin)
ArteriesSuperior rectal artery (from the inferior mesenteric artery)Inferior rectal arteries (from the internal pudendal)
VeinsSuperior rectal vein → inferior mesenteric vein → portal systemInferior rectal veins → internal pudendal → internal iliac (systemic)
LymphInternal iliac (and inferior mesenteric) nodesSuperficial inguinal nodes
NervesVisceral (autonomic), sensitive only to stretch — lesions are painlessSomatic (inferior rectal nerves from the pudendal nerve) — lesions are painful
HemorrhoidsInternal: painless bright-red bleeding, prolapseExternal: perianal swelling; a thrombosed one is an acutely painful blue lump
CancerAdenocarcinomaSquamous cell carcinoma (HPV-associated)

The middle rectal arteries anastomose with both supplies, and the rectal venous plexus is a portosystemic anastomosis.

An anal fissure lies below the line (usually posterior midline), so it is very painful. See anal canal and pelvic and inguinal lymph drainage.